Vibrant Functional Academy

Low Pancreatic Elastase: The Hidden Factor Behind Poor Nutrient Absorption and Gut Imbalance

Written by Michael Smith, N.D. | Jan 24, 2025 8:43:50 PM

Do you have clients who are eating a great diet, but their lab tests come back showing low levels of iron, B12, zinc, and other nutrients?

The problem may not be in what they are eating but what they are absorbing–and a key component of nutrient absorption is pancreatic enzymes.

Studies have found that approximately 5-6% of patients diagnosed with diarrhea-predominant Irritable Bowel Syndrome (IBS-D) actually have undiagnosed exocrine pancreatic insufficiency (EPI).1 Along with poor nutrient levels, it’s helpful to check for pancreatic insufficiency with clients who have digestive symptoms.The good news? We can easily test pancreatic elastase levels with the Gut Zoomer test.

In this article, we will focus on the causes of low pancreatic elastase, how to test for it, and what can be done to improve levels naturally.

Table of Contents

Symptoms of Low Pancreatic Elastase

Case Study

What Causes Low Pancreatic Enzymes?

Top Diet and Lifestyle Strategies to Improve Pancreatic Elastase

How To Treat Low Pancreatic Elastase Levels

The Next Steps

 

Symptoms of Low Pancreatic Elastase

First, let's examine some of the common symptoms of low pancreatic enzymes. 

Sometimes, clients need to know “why” they are doing tests. And if they have many of these symptoms, it is easier to convince them that testing is necessary.

The most common symptoms of low pancreatic enzymes, or pancreatic insufficiency, often relate to poor digestion and nutrient absorption. 

Here are the key signs that may prompt someone to get tested:

Bloating and Excessive Gas

When pancreatic enzymes are insufficient, food isn’t fully digested, leading to fermentation in the gut.2 This results in bloating, gas, and discomfort after meals.

Diarrhea or Loose, Floating Stools

Without enough enzymes to break down fats, carbohydrates, and proteins, undigested food passes quickly through the intestines, leading to diarrhea or loose stools. Fat malabsorption can also cause stools to float, appear greasy, or have an oily residue.3

Abdominal Pain or Cramping

Poor digestion due to low enzyme levels can cause cramping or discomfort, particularly after eating a large meal or foods high in fat.4

Fatigue and Low Energy Levels

When nutrients aren’t absorbed properly, individuals may experience fatigue or weakness, even with adequate calorie intake.5

Unintentional Weight Loss

People with low pancreatic enzymes often lose weight unintentionally, as they’re not absorbing enough calories or nutrients from food.6

Fatty Stools (Steatorrhea)

A hallmark of low pancreatic enzyme levels, steatorrhea is characterized by pale, bulky, foul-smelling stools that may appear greasy or oily. This occurs because undigested fats are excreted rather than absorbed.

Nutrient Deficiencies

Over time, low enzyme levels can lead to deficiencies in fat-soluble vitamins (A, D, E, K) and other essential nutrients like vitamin B12, iron, and zinc.7 Symptoms can include anemia, easy bruising, bone pain, and vision problems.

Indigestion and Feeling Full Quickly

Without adequate enzymes, food sits in the stomach longer, leading to feelings of fullness, nausea, and indigestion, especially after meals.

Of course, these symptoms can be caused by many things, which is why testing with the Gut Zoomer is beneficial–it helps identify other possible causes for these symptoms.

What Causes Low Pancreatic Enzymes?

When a stool test reveals low pancreatic elastase, the immediate response might be to recommend digestive enzymes to support nutrient absorption and relieve digestive symptoms.

While this might be a good first step, we also need to understand the cause of enzyme deficiency to help increase the natural production of enzymes and reduce reliance on supplements.

One of the most common causes of low pancreatic enzymes is chronic pancreatitis,8 which can be assessed using blood tests for markers like lipase and amylase, along with imaging studies to assess pancreatic health.

However, other potential causes can be assessed with Vibrant Wellness tests such as the Gut Zoomer, Wheat Zoomer, and the Urinary Hormones panel. For example:

  • The Gut Zoomer can help identify imbalances in the microbiome or signs of gut inflammation that might be impairing enzyme production.
  • The Wheat Zoomer can pinpoint gluten sensitivity or autoimmune reactions that could indirectly stress the pancreas.
  • The Urinary Hormones Panel may reveal hormonal imbalances—like elevated cortisol or low thyroid function—that could impact digestive enzyme output.

Let’s explore some of the key factors these tests can help identify:

Chronic Inflammation and Gut Dysbiosis

Gut inflammation, often related to gut dysbiosis or conditions like irritable bowel syndrome (IBS) and small intestinal bacterial overgrowth (SIBO), can interfere with pancreatic enzyme production. Chronic gut inflammation can disrupt how the pancreas works, reducing enzyme production.9

The Gut Zoomer tests for a wide range of inflammatory markers and dysbiotic bacteria and is the perfect test to start with.

Poor Diet and Lifestyle Factors

Diets high in processed foods and sugars or low in nutrient density strain the digestive system and can lead to enzyme depletion. Over time, such diets contribute to inflammation, which may impact pancreatic function indirectly.

The Wheat Zoomer can assess celiac disease and also non-celiac gluten sensitivity, both of which can affect pancreatic enzyme levels. Plus, the Wheat Zoomer can assess intestinal hyperpermeability (“leaky gut”) and lipopolysaccharide (LPS) levels, which can help providers develop a treatment plan.

If a reaction to wheat is detected, the first step is to eliminate it from the diet and then assess both the client's response to a gluten-free diet and how they respond to a wheat challenge in the future. 

Additionally, the presence of leaky gut can help explain systemic symptoms and indicate that a gut healing protocol should be included in the treatment plan.

Low Stomach Acid

Low stomach acid (hypochlorhydria) is a common issue, especially in people using acid-suppressing medications or with H. pylori infection. Stomach acid stimulates the release of cholecystokinin (CCK), a hormone that triggers the pancreas to secrete digestive enzymes into the small intestine and the gallbladder to release bile.10

The Gut Zoomer assesses for H. pylori infection, along with levels of fat present in the stool.

Stress

Stress activates the fight-or-flight response (sympathetic nervous system), which prioritizes energy for immediate survival needs. This redirection of resources reduces blood flow to the digestive system, including the pancreas, and lowers digestive secretions.11

Oftentimes, clients don’t realize how stressed they actually are. The Vibrant Wellness Urinary Hormones test can measure cortisol levels so they can see how stressed they are–and feel inspired to take action.

Alcohol Use

Chronic or heavy alcohol use is another leading cause of low pancreatic enzymes, as it directly damages pancreatic tissue. While chronic pancreatitis from long-term alcohol use is a clear cause, even moderate but consistent alcohol intake can have a cumulative effect on enzyme production, especially if other triggers like smoking, obesity, and poor diet are present.12

Gallbladder Dysfunction or Bile Acid Abnormalities

Gallbladder dysfunction or bile acid abnormalities can indirectly reduce pancreatic enzyme output because bile release helps trigger pancreatic enzyme production.13 Bile acid levels can be measured with the Gut Zoomer test.

Autoimmune 

Sjögren's syndrome can cause inflammation in the pancreas, leading to low pancreatic elastase levels. Other autoimmune conditions like systemic lupus erythematosus (SLE) and Type 1 diabetes can also potentially affect the pancreas.14

The Vibrant Wellness Autoimmune Zoomer is a new test option that tests for 63 different autoimmune conditions and is a great screening tool for identifying autoimmune conditions.

How To Treat Low Pancreatic Elastase Levels

While supplementing digestive enzymes that contain lipase, amylase, and protease can help provide symptomatic relief by improving digestion and absorption, we also need to treat the underlying cause.

If H.pylori is a contributing factor, I always prioritize treating it first. Once that is managed, the next step is to focus on assessing stress levels, evidence of SIBO, and investigating other potential triggers for low digestive enzyme levels.

Typically, with this systematic approach to patient assessment, you can identify the underlying cause and help restore pancreatic function. 

This is more difficult in older clients, and they may require long-term enzyme supplementation. As people age, there is a decline in pancreatic function which is difficult to reverse. Additionally, many older adults who take medications like proton pump inhibitors (PPIs) long-term have other health conditions like diabetes that can affect pancreatic function.

Case Study

One of the most unusual cases I've encountered was a pancreatic elastase level in the 60s—extremely low—triggered by a box jellyfish sting to the abdomen. The box jellyfish, one of the world's most venomous creatures, can cause severe organ damage and be potentially fatal. 

Following the jellyfish sting, the patient developed severe IBS and tested positive for SIBO. They tried various treatments without symptom improvement.

We performed a stool test and identified low pancreatic elastase levels, and we were able to improve their symptoms with supplementation. Over 18 months, their elastase levels improved significantly, with their most recent Gut Zoomer test showing pancreatic elastase levels of 197. This score is still not optimal, but the continued improvement is encouraging.

Top Diet and Lifestyle Strategies to Improve Pancreatic Elastase

Dietary Changes

  1. Balanced, Nutrient-Dense Diet 
    Focus on minimally processed foods rich in essential nutrients to support overall health and digestion. This includes healthy fats, lean proteins, and high-fiber foods.

  2. Pancreatic Enzyme Replacement Therapy (PERT)
    Taking enzyme supplements with meals is a standard treatment for EPI and helps improve nutrient absorption and alleviate symptoms. Digestive bitters are another option to help stimulate the body to produce more enzymes.

  3. Healthy Fats
    Incorporate healthy fats like nuts, seeds, olive oil, and avocados while limiting trans fats and excessive saturated fats.

  4. Lean Proteins
    Opt for lean protein sources such as chicken, turkey, fish, eggs, and tofu to support overall health and muscle maintenance.

  5. Moderate High-Fiber Foods
    Balance fiber intake, as too much fiber can exacerbate digestive symptoms in those with EPI. Consider reducing high-fiber foods if they cause issues. Reactions to fiber can also be a red flag for SIBO.

Lifestyle Modifications

  1. Weight Management 
    Maintaining a healthy weight through diet and regular physical activity can reduce stress on the pancreas. Researchers at the Mayo Clinic have found that obesity not only can increase the risk of endocrine disorders like diabetes but can also cause pancreatitis and increase the risk of EPI.

  2. Regular Exercise
    Physical activity supports metabolic health, improves insulin sensitivity, and reduces inflammation. There are even studies showing it can help with pancreatic enzyme levels17.

  3. Stress Management 
    Engage in stress-relieving practices such as meditation, yoga, or other hobbies, as chronic stress can impact pancreatic health. I find the Nerva program an excellent option to balance the gut-brain connection.

  4. Avoid Alcohol and Smoking
    Both alcohol and smoking can damage the pancreas and should be limited or avoided to protect pancreatic function.

  5. Adequate Hydration 
    Staying well-hydrated is important for overall digestive health and helps manage symptoms like diarrhea associated with EPI.

The Next Steps

Every case is different, which is why starting with a thorough case history is essential. However, while a case history can provide valuable context, it won’t confirm whether low pancreatic enzymes or hidden gut infections are contributing to symptoms. That’s why I always recommend a data-driven approach to treatment plans.

Many people with digestive issues turn to digestive enzymes, hoping for relief. However, testing often reveals that their pancreatic function is perfectly normal, meaning they’ve been taking supplements unnecessarily. This underscores the value of testing—not only to pinpoint what’s really happening in the body but also to avoid unnecessary treatments and costs. (Note: Digestive enzymes won’t interfere with test results).

If you have a client with digestive problems and can only run one test, the Gut Zoomer is an excellent starting point. It provides a wealth of information about gut health and can highlight factors that may be contributing to their symptoms. If your client’s budget allows, additional tests—such as the Wheat Zoomer, Autoimmune Zoomer, or Urinary Hormones Panel—can provide a more comprehensive view of their overall health, helping you refine and personalize their treatment plan.

By relying on strategic testing, you can move beyond guesswork and offer your clients a more effective path to improved digestive health.

About the Author

Michael Smith, N.D., is a naturopath specializing in functional medicine with over 20 years of experience. He works with clients worldwide through video and phone consultations, offering personalized health solutions. Michael combines advanced testing, nutritional and herbal medicine, and lifestyle strategies to address the root causes of health issues, helping clients achieve lasting results.

References:  

  1. Exocrine Pancreatic Insufficiency is Undiagnosed in Some Patients with Diarrhea-Predominant Irritable Bowel Syndrome Using the Rome IV Criteria https://pubmed.ncbi.nlm.nih.gov/35704255/
  2. AGA Clinical Practice Update on the Epidemiology, Evaluation, and Management of Exocrine Pancreatic Insufficiency: Expert Review https://pubmed.ncbi.nlm.nih.gov/37737818/ 
  3. A primer on exocrine pancreatic insufficiency, fat malabsorption, and fatty acid abnormalities https://pubmed.ncbi.nlm.nih.gov/28727474/ 
  4. Rational Use of Pancreatic Enzymes for Pancreatic Insufficiency and Pancreatic Painhttps://pubmed.ncbi.nlm.nih.gov/31482505/ 
  5. Qualitative Assessment of the Symptoms and Impact of Pancreatic Exocrine Insufficiency (PEI) to Inform the Development of a Patient-Reported Outcome (PRO) Instrument https://pmc.ncbi.nlm.nih.gov/articles/PMC5605612/ 
  6. Diagnosis and treatment of pancreatic exocrine insufficiency https://pubmed.ncbi.nlm.nih.gov/24259956/ 
  7. Nutritional Support in Pancreatic Diseases https://pubmed.ncbi.nlm.nih.gov/36364832/ 
  8. Diagnosis and treatment of pancreatic exocrine insufficiency https://pubmed.ncbi.nlm.nih.gov/24259956/ 
  9. The Gut Microbiome in Patients With Chronic Pancreatitis Is Characterized by Significant Dysbiosis and Overgrowth by Opportunistic Pathogens https://pubmed.ncbi.nlm.nih.gov/33094959/
  10. Less common etiologies of exocrine pancreatic insufficiency https://pubmed.ncbi.nlm.nih.gov/29093615/ 
  11. State of anxiety may be associated with exocrine pancreatic insufficiency in functional dyspepsia patients with pancreatic enzyme abnormalities https://pmc.ncbi.nlm.nih.gov/articles/PMC8921718/ 
  12. Pancreatitis & Alcohol: Alcohol’s Effect on the Pancreas https://americanaddictioncenters.org/alcohol/risks-effects-dangers/gastrointestinal/pancreatitis 
  13. Role of bile acids in the control of pancreatic secretion and CCK release https://pubmed.ncbi.nlm.nih.gov/2124998/ 
  14. Pancreatic Insufficiency https://www.ncbi.nlm.nih.gov/books/NBK555926/ 
  15. Helicobacter pylori and Pancreatic Disease https://www.primescholars.com/articles/helicobacter-pylori-and-pancreatic-disease-98635.html 
  16. Mayo Clinic-led study links obesity with pancreatitis https://newsnetwork.mayoclinic.org/discussion/mayo-clinic-led-study-links-obesity-with-pancreatitis/
  17. Effects of long‐term exercise training for different durations on pancreatic amylase activity and intestinal glucose transporter content in rats https://pmc.ncbi.nlm.nih.gov/articles/PMC6813256/

Regulatory Statement:

The information presented in case studies have been de-identified in accordance with the HIPAA Privacy protection.

The general wellness test intended uses relate to sustaining or offering general improvement to functions associated with a general state of health while making reference to diseases or conditions. This test has been laboratory developed and its performance characteristics determined by Vibrant America LLC and Vibrant Genomics, a CLIA-certified and CAP-accredited laboratory performing the test. The lab tests referenced have not been cleared or approved by the U.S. Food and Drug Administration (FDA). Although FDA does not currently clear or approve laboratory-developed tests in the U.S., certification of the laboratory is required under CLIA to ensure the quality and validity of the test.